Resources


Database Open Access

NIDX: A Machine Learning Approach for Identifying People with Neuroinfectious Diseases in Electronic Health Records

Arjun Singh, Shadi Sartipi, Haoqi Sun, Niels Turley, Sahar Zafar, Sudeshna Das, Marta Fernandes, M Brandon Westover, Shibani Mukerji

A machine learning approach to accurately identify neuroinfectious diseases from clinical notes.

natural language processing electronic health records ehr phenotyping neuroinfectious diseases

Published: May 31, 2025. Version: 1.0

Database Credentialed Access

Dementia detection from brain activity during sleep - data and code

Elissa Ye, Haoqi Sun, Wolfgang Ganglberger, Robert Thomas, Alice Lam, M Brandon Westover

Code and curated polysomnography dataset (10,784 PSGs from 8,044 patients, MGB Sleep Lab 2009-2019) used in Ye et al. 2023 (Sleep) to detect dementia and MCI from sleep EEG features.

machine learning biomarker sleep mild cognitive impairment polysomnography dementia eeg

Published: April 25, 2026. Version: 1.0.0

Database Credentialed Access

Identification of patients with epilepsy using automated electronic health records phenotyping - Data and Code

Marta Fernandes, Sahar Zafar, M Brandon Westover

Code and data for identifying patients with epilepsy using automated electronic health records.

nlp ehr epilepsy

Published: June 5, 2025. Version: 1.0

Model Open Access

Automated phenotyping of mild cognitive impairment and Alzheimer's disease and related dementias using electronic health records

Ruoqi Wei, Niels Turley, Aditya Gupta, Manohar Ghanta, Robert Thomas, Sahar Zafar, Haoqi Sun, M Brandon Westover

a MCI/ADRD EHR phenotyping model trained with python sklearn pipeline, injoblib format.

Published: Sept. 25, 2025. Version: 1.1