Resources


Database Credentialed Access

Automated phenotyping of mild cognitive impairment and dementias using electronic health records - Data and Code

Ruoqi Wei, Robert Thomas, M Brandon Westover, Haoqi Sun

Data and Code to reproduce results in "Automated phenotyping of mild cognitive impairment and dementias using electronic health records"

nlp ad mci

Published: June 5, 2025. Version: 1.0

Database Credentialed Access

Stanford Sleep Bench

Magnus Ruud Kjaer, Rahul Thapa, Gauri Ganjoo, Hyatt Moore, Poul Jennum, M Brandon Westover, James Zou, Bryan He, Andreas Brink-Kjaer, Emmanuel Mignot

Data used to train a sleep foundation model.

foundation model sleep

Published: Nov. 20, 2025. Version: 1.0

Database Credentialed Access

Narcolepsy Risk Estimation from Clinical Notes

Niels Turley, Haoqi Sun, M Brandon Westover

Dataset and code for developing and validating machine learning models to phenotype narcolepsy type 1 (NT1) and narcolepsy type 2/idiopathic hypersomnia (NT2/IH) from multi-site electronic health record data, including cross-sectional classification

Published: March 2, 2026. Version: 1.0

Database Open Access

Assessing Risk of Health Outcomes From Brain Activity in Sleep

Haoqi Sun, Noor Adra, Muhammad Ayub, Wolfgang Ganglberger, Elissa Ye, Ziwei Fan, Aditya Gupta, Valdery Moura Junior, M Brandon Westover, Robert Thomas

Using sleep EEG to predict future health outcomes.

Published: Oct. 30, 2025. Version: 1.1

Model Open Access

Automated phenotyping of mild cognitive impairment and Alzheimer's disease and related dementias using electronic health records

Ruoqi Wei, Niels Turley, Aditya Gupta, Manohar Ghanta, Robert Thomas, Sahar Zafar, Haoqi Sun, M Brandon Westover

a MCI/ADRD EHR phenotyping model trained with python sklearn pipeline, injoblib format.

Published: Sept. 25, 2025. Version: 1.1

Database Restricted Access

SpikeNet 2.0

Jun Li, Daniel Goldenholz, Shenda Hong, Chenxi Sun, Jin Jing, M Brandon Westover

An expert-level deep learning model for detecting epileptiform discharges in EEG recordings at both event and whole-EEG levels.

Published: April 30, 2025. Version: 1.0

Database Restricted Access

Automated EEG-based prediction of delayed cerebral ischemia after subarachnoid hemorrhage

Zhongwei Jin, Wei-Long Zheng, M Brandon Westover, Jennifer Kim

Data and code to reproduce this paper: https://pmc.ncbi.nlm.nih.gov/articles/PMC9847346/

Published: April 4, 2025. Version: 1.0

Database Restricted Access

TEEGLLTEEG: This EEG Looks Like That EEG

Alina Jade Barnett, Stark Guo, Jin Jing, Cynthia Rudin, M Brandon Westover

TEEGLLTEEG

Published: March 26, 2025. Version: 1.2

Database Restricted Access

Morphological Prediction of CPAP Associated Acute Respiratory Instability (Self Similarity)

Thijs E Nassi, Gonzalo Labarca, Robert Thomas, M Brandon Westover

Algorithm to detect breathing pattern self-similarity to predict CPAP therapy outcomes in OSA

Published: March 3, 2025. Version: 1.0

Database Restricted Access

Cyclops: Automated detection of interictal epileptiform discharges with few EEG channels

Moritz Maximilian Alkofer, M Brandon Westover, Jin Jing, Daniel Goldenholz

Cyclops dataset

Published: March 1, 2025. Version: 2.0